CRISPResso2

CRISPResso2

Analysis of genome editing outcomes from deep sequencing data

CRISPResso Batch Output

FANCF_untr FANCF_BE1 FANCF_BE2 FANCF_BE3
Nucleotide percentages around guides
sgRNA: GGAATCCCTTCTGCAGCACC Amplicon: Reference
Composition of each base around the guide GGAATCCCTTCTGCAGCACC for the amplicon Reference

Data: Nucleotide frequencies

Data: Modification frequencies

Nucleotide percentages in the entire amplicon
Composition of each base for the amplicon Reference

Data: Nucleotide frequencies

Data: Modification frequencies

Conversion of target bases around guides
C->T conversion rates around the guide GGAATCCCTTCTGCAGCACC for the amplicon Reference

Data: Nucleotide frequencies around sgRNA

Data: Nucleotide percentages around sgRNA

Conversion of target bases in the entire amplicon
C->T conversion rates for the amplicon Reference

Data: Nucleotide frequencies

Data: Modification frequencies

Summary Plots
Insertions: Reference
Percentage of aligned reads with insertions at each position in Reference.

Data: Reference modification frequencies (fractions)

Percentage of aligned reads with insertions at each position in Reference.

Data: Reference modification frequencies (fractions)

Deletions: Reference
Percentage of aligned reads with deletions at each position in Reference.

Data: Reference modification frequencies (fractions)

Percentage of aligned reads with deletions at each position in Reference.

Data: Reference modification frequencies (fractions)

Substitutions: Reference
Percentage of aligned reads with substitutions at each position in Reference.

Data: Reference modification frequencies (fractions)

Percentage of aligned reads with substitutions at each position in Reference.

Data: Reference modification frequencies (fractions)

All modifications: Reference
Percentage of aligned reads with all modifications at each position in Reference.

Data: Reference modification frequencies (fractions)

Percentage of aligned reads with all modifications at each position in Reference.

Data: Reference modification frequencies (fractions)