Amplicon Unmodified% Modified% Reads_in_input Reads_aligned_all_amplicons Reads_aligned Unmodified Modified Discarded Insertions Deletions Substitutions Only Insertions Only Deletions Only Substitutions Insertions and Deletions Insertions and Substitutions Deletions and Substitutions Insertions Deletions and Substitutions Reference 96.37690019 3.62309981 25000 24537 24537 23648 889 0 4 50 846 0 43 836 0 3 6 1